Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015790552.1_cds_XP_016502211.1_1496
CDS Infomation

[gene=LOC107820429] [db_xref=GeneID:107820429] [protein=arginine decarboxylase-like isoform X2] [protein_id=XP_016502211.1] [location=complement(join(70472..71497,71608..72162,73667..73738,73887..73910))] [gbkey=CDS]
Sequence

ATGTCTTCTGCAAGTCTGGATATGAGTTTTGCTGGGAGTTTTTGCAGGAAATGGAGTTTC
AGGCCTTGTAGAAGACCAAAATCTTGCATTTCTCAAGAAAGCAATGGTAAAATGTTCAGG
AAATTCAAGAACTGTTTAAGCTCTGTAGGGTATAATGGAGTTCCTTTAACAGAAATTTCT
TGTGCTCCAAGTGCTGCAATCTGTCAAAATGAGCTGCCTCCACTTGTTAGTGCTTTAAAA
GCTTCAGCTGAAGAAAATGCTGCAAGTTTTCATTTTCCTGGCCATAACAGAGGGAAAGCA
GCACCATCATCATTGACTCAGCTCATTGGTTCAAAACCGTTTCTACATGATTTACCTGAG
CTTCCAGAGCTTGACAATCTCTTTTCTCCAGAAGGTCCCATTTTAGAAGCACAAAAACAA
GCGGCAAGGCTTTTTGGAGCATCAGAAACATGGTTCCTTGTTGGTGGTAGTACATGTGGA
ATTCAGGCCGCCATTATGGCGACTTGTTCACCTGGAGATACTCTTATTCTACCACGGAAT
TCTCATATCTCAGCCATATCTTCCATGGTATTGTCTGGTGCACTCCCAAAGTACGTCGTC
CCTGAATATGATTTCAACTGGGATGTCGCTGGTGACATCACTCCATCACAGGTACGCAAA
GCAATCAATGAGCTAGAAATGGAGGGCCGAAAAGCAGTTGCCGTTTTGGTTGTCTCCCCT
ACCTATCACGGTATATGCAGCAACTTGGATGAGATCTGTGAGATCTGTCATTCTCACAGT
ATCCCCGTAATTGTTGATGAGGCTCATGGCGCTCACTTAGGATTTCATCCGAAGCTGCCT
AGCTCATCCTTGAGCCAGGGAGCTGATCTTTCCGTACAGTCTACTCACAAAGTTTTGTGT
GCACTTACGCAATCATCAATGTTGCACATGCAAGGAAATCTTGTGGATAGAGAAAGAATC
AGCAGAAGCCTACAAATGCTTCAAAGTAGTAGCCCAAGTTATCTGCTTTTAGCATCTCTG
GATGCTGCCAGGGCCCAACTGAGTGAAAATAGAGAGGCAATTTTTGACAAAGCAATGAAC
TTGGCAATGGAAGCAAGAAGCTTGATTAGTAAAATTCCTGGAATCTCAGTCCTTGAGTTT
CCAAGTTTTTCTAGTTCTTTTTCCATTGACCCACTGCGATTCACCATTGGTGTATGGCAG
TTAGGTCTTTCAGGTTTTGAAGCAGATGATATATTGTGCAAAGATTTTGGTGTTGTTTGT
GAACTTGTAGGGACCAAATCTTTTACTTTGGCGTTTAACTTAGGGACTCAAAGGGATCAT
GTTCTTAGGCTTGTAGCCGGTCTAAAGCATCTATCAGAAGCTTCTCACTTTCATCAACCT
GTGAAAGATGAAGGCAAAAATGTAAATCATTTTGCATGCTTTGGTGATGTTAGAATGAGC
ATGAGCCCTAGAGAGGCCTTCTTTGCTAAAAAACGTAAAGTCAGCATAAGAGATAGCCTC
GGTGAAATTTGTGGAGAGCTTGTATGTCCTTATCCACCTGGTATTCCAGTGCTAATTCCT
GGTGAGATCATCACAGAAAGAGCGTTGAGTTATCTCCTGGAGATCAGGAGCAAGGGTGCT
GTTATTACTGGAGCAGCTGATTGCTCCCTATCATCTTTTGTTGTATGTGTTACCTAA

Peptide Sequence

PEP ID

XP_016502211.1
PEP Infomation

PREDICTED: arginine decarboxylase-like isoform X2 [Nicotiana tabacum]
Sequence

MSSASLDMSFAGSFCRKWSFRPCRRPKSCISQESNGKMFRKFKNCLSSVGYNGVPLTEIS
CAPSAAICQNELPPLVSALKASAEENAASFHFPGHNRGKAAPSSLTQLIGSKPFLHDLPE
LPELDNLFSPEGPILEAQKQAARLFGASETWFLVGGSTCGIQAAIMATCSPGDTLILPRN
SHISAISSMVLSGALPKYVVPEYDFNWDVAGDITPSQVRKAINELEMEGRKAVAVLVVSP
TYHGICSNLDEICEICHSHSIPVIVDEAHGAHLGFHPKLPSSSLSQGADLSVQSTHKVLC
ALTQSSMLHMQGNLVDRERISRSLQMLQSSSPSYLLLASLDAARAQLSENREAIFDKAMN
LAMEARSLISKIPGISVLEFPSFSSSFSIDPLRFTIGVWQLGLSGFEADDILCKDFGVVC
ELVGTKSFTLAFNLGTQRDHVLRLVAGLKHLSEASHFHQPVKDEGKNVNHFACFGDVRMS
MSPREAFFAKKRKVSIRDSLGEICGELVCPYPPGIPVLIPGEIITERALSYLLEIRSKGA
VITGAADCSLSSFVVCVT

Transcript Sequence

Gene sequence data has not been registered.